WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP59404 Name  Ppa-FRM-2
Molecular Weight (kDa)  135.5 Length  1214
Organism  Pristionchus pacificus MD5 Checksum  95fd1218621d6135a2dff097a632fc4f
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1214
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA14350 PPA14350   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

45 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
SMART:SM01196
PFSCAN:PS50057
PFAM:PF09380
SMART:SM00295
INTERPRO:IPR018980
SUPERFAMILY:SSF47031
SUPERFAMILY:SSF50156
INTERPRO:IPR001478
INTERPRO:IPR036034
SUPERFAMILY:SSF54236
INTERPRO:IPR019748
INTERPRO:IPR018979
PRINTS:PR00935
INTERPRO:IPR035963
INTERPRO:IPR019749
SCANPROSITE:PS00661
PFAM:PF00373
SCANPROSITE:PS00660
PFAM:PF09379
INTERPRO:IPR014352
HMMPANTHER:PTHR23280
INTERPRO:IPR029071
PFSCAN:PS50106
SMART:SM00228
PFAM:PF00595
PFAM:PF08736