WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP67440 Name  Ppa-VMS-1
Molecular Weight (kDa)  149.8 Length  1324
Organism  Pristionchus pacificus MD5 Checksum  e0d473b786ceb7dbe2d4b1410c2fc4ae
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1324
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA17887 PPA17887   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

27 Motifs

WormBase ID
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFAM:PF00169
PFSCAN:PS50297
PFSCAN:PS50088
SUPERFAMILY:SSF48403
INTERPRO:IPR036770
PFAM:PF00293
SUPERFAMILY:SSF55811
INTERPRO:IPR000086
INTERPRO:IPR015797
PFSCAN:PS51462
INTERPRO:IPR023394
INTERPRO:IPR035999
PFSCAN:PS50190
SMART:SM00222
PFAM:PF01369
SUPERFAMILY:SSF48425
INTERPRO:IPR000904
TIGRFAM:TIGR02150
INTERPRO:IPR011876
HMMPANTHER:PTHR16036
INTERPRO:IPR041175
PFAM:PF18826