WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP52306 Name  Ppa-TANK-1
Molecular Weight (kDa)  271.6 Length  2481
Organism  Pristionchus pacificus MD5 Checksum  10ea75880f6be688c647573c7feb16a9
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
2481
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA18119 PPA18119   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

34 Motifs

WormBase ID
INTERPRO:IPR013083
SUPERFAMILY:SSF57850
SCANPROSITE:PS00518
PRINTS:PR01415
PFSCAN:PS50297
PFSCAN:PS50088
SMART:SM00248
PFAM:PF12796
SUPERFAMILY:SSF48403
INTERPRO:IPR002110
INTERPRO:IPR036770
PFSCAN:PS50089
SMART:SM00184
INTERPRO:IPR001841
INTERPRO:IPR020683
INTERPRO:IPR027370
PFAM:PF13445
PFAM:PF13637
SUPERFAMILY:SSF142921
SUPERFAMILY:SSF56399
INTERPRO:IPR004102
INTERPRO:IPR012317
INTERPRO:IPR008893
INTERPRO:IPR036930
INTERPRO:IPR036616
SMART:SM00773
PFSCAN:PS51059
PFAM:PF05406
PFAM:PF02877
PFAM:PF00644