WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP53818 Name  Ppa-BTF-1
Molecular Weight (kDa)  235.0 Length  2098
Organism  Pristionchus pacificus MD5 Checksum  ab3f601d5b4cba1127854915097756d9
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
2098
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA18520 PPA18520   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

19 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR011989
SUPERFAMILY:SSF48371
INTERPRO:IPR016024
INTERPRO:IPR014001
SMART:SM00490
SMART:SM00487
PFAM:PF00271
INTERPRO:IPR001650
PFSCAN:PS51194
PFSCAN:PS51192
PFAM:PF00176
INTERPRO:IPR000330
INTERPRO:IPR038718
HMMPANTHER:PTHR10799
INTERPRO:IPR022707
PFAM:PF12054
HMMPANTHER:PTHR10799:SF814