WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP73948 Name  PPA18747
Molecular Weight (kDa)  355.1 Length  3121
Organism  Pristionchus pacificus MD5 Checksum  245e4464724a6db08e10da80425cc99f
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
3121
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA18747 PPA18747   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

29 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR013783
SMART:SM00175
TIGRFAM:TIGR00231
INTERPRO:IPR005225
SUPERFAMILY:SSF53756
SUPERFAMILY:SSF56784
INTERPRO:IPR023214
INTERPRO:IPR036412
SMART:SM00177
PFSCAN:PS50202
PFAM:PF00635
SUPERFAMILY:SSF49354
INTERPRO:IPR000535
INTERPRO:IPR008962
INTERPRO:IPR006954
PFAM:PF04870
INTERPRO:IPR006689
PFSCAN:PS51417
PRINTS:PR00328
SMART:SM00178
PFAM:PF00025
PFAM:PF00982
HMMPANTHER:PTHR10788
PFAM:PF18572
INTERPRO:IPR001830
INTERPRO:IPR041064
HMMPANTHER:PTHR10788:SF78