WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP60227 Name  Ppa-SOS-1
Molecular Weight (kDa)  137.3 Length  1208
Organism  Pristionchus pacificus MD5 Checksum  f4197d7aac91b47ee46892df11470a3d
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1208
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA19092 PPA19092   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

27 Motifs

WormBase ID
INTERPRO:IPR008937
INTERPRO:IPR001895
INTERPRO:IPR036964
PFAM:PF00618
INTERPRO:IPR023578
SMART:SM00229
PFAM:PF00617
SMART:SM00147
SUPERFAMILY:SSF48366
INTERPRO:IPR000651
HMMPANTHER:PTHR23113
PFSCAN:PS50212
PFSCAN:PS50009
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
SMART:SM00325
PFSCAN:PS50010
INTERPRO:IPR035899
PFAM:PF00621
SUPERFAMILY:SSF48065
INTERPRO:IPR000219
PFSCAN:PS51257
INTERPRO:IPR009072
HMMPANTHER:PTHR23113:SF150