WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP61275 Name  Ppa-LRK-1
Molecular Weight (kDa)  265.7 Length  2391
Organism  Pristionchus pacificus MD5 Checksum  4ed49ec142dfe2b5700f683d3a48f9f7
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
2391
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA19720 PPA19720   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

34 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
SUPERFAMILY:SSF50182
INTERPRO:IPR010920
SUPERFAMILY:SSF56112
INTERPRO:IPR011009
PFSCAN:PS50011
PRINTS:PR01415
PFSCAN:PS50297
PFSCAN:PS50088
SMART:SM00248
PFAM:PF12796
SUPERFAMILY:SSF48403
INTERPRO:IPR002110
INTERPRO:IPR036770
PFAM:PF00069
INTERPRO:IPR000719
SMART:SM00220
SMART:SM00651
PFAM:PF01423
INTERPRO:IPR001163
SCANPROSITE:PS00108
INTERPRO:IPR020683
SUPERFAMILY:SSF52058
INTERPRO:IPR032675
HMMPANTHER:PTHR24198
PFAM:PF13855
INTERPRO:IPR003591
SMART:SM00369
INTERPRO:IPR001611