WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP54196 Name  PPA21829
Molecular Weight (kDa)  343.8 Length  3140
Organism  Pristionchus pacificus MD5 Checksum  9d56f6fb7f963fa2a259617e9cfc1aed
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
3140
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA21829 PPA21829   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

26 Motifs

WormBase ID
PFSCAN:PS50157
SCANPROSITE:PS00028
SMART:SM00355
PFAM:PF00096
SUPERFAMILY:SSF57667
INTERPRO:IPR013087
INTERPRO:IPR036236
SUPERFAMILY:SSF49764
INTERPRO:IPR008978
SMART:SM00451
INTERPRO:IPR003604
PFAM:PF12874
PFAM:PF04969
INTERPRO:IPR007052
PFSCAN:PS51203
HMMPANTHER:PTHR13825
INTERPRO:IPR005959
PFAM:PF01557
INTERPRO:IPR011234
SUPERFAMILY:SSF56529
INTERPRO:IPR036663
INTERPRO:IPR036462
INTERPRO:IPR015377
PFAM:PF09298
TIGRFAM:TIGR01266
SUPERFAMILY:SSF63433