WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP61122 Name  Ppa-LYST-1
Molecular Weight (kDa)  346.9 Length  3102
Organism  Pristionchus pacificus MD5 Checksum  a2748387720f50235394ffc783363ff6
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
3102
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA26366 PPA26366   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

22 Motifs

WormBase ID
PFSCAN:PS50294
SMART:SM00320
SUPERFAMILY:SSF50978
INTERPRO:IPR001680
INTERPRO:IPR015943
INTERPRO:IPR036322
PFSCAN:PS50082
SUPERFAMILY:SSF50729
SUPERFAMILY:SSF49899
INTERPRO:IPR013320
HMMPANTHER:PTHR13743
PFSCAN:PS51783
PFSCAN:PS50197
PFAM:PF14844
SMART:SM01026
SUPERFAMILY:SSF81837
PFAM:PF02138
INTERPRO:IPR023362
INTERPRO:IPR000409
INTERPRO:IPR036372
HMMPANTHER:PTHR13743:SF86
INTERPRO:IPR030464