WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP72797 Name  Ppa-IRE-1.1
Molecular Weight (kDa)  117.7 Length  1051
Organism  Pristionchus pacificus MD5 Checksum  fe54e446b15ca7666ac21dcb08f24525
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1051
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA27636 PPA27636   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

23 Motifs

WormBase ID
INTERPRO:IPR015943
SUPERFAMILY:SSF56112
INTERPRO:IPR011009
PFSCAN:PS50011
PFAM:PF00069
INTERPRO:IPR000719
SMART:SM00220
SUPERFAMILY:SSF50998
INTERPRO:IPR011047
SCANPROSITE:PS00108
INTERPRO:IPR018997
SMART:SM00580
INTERPRO:IPR002372
PFAM:PF13360
INTERPRO:IPR018391
SMART:SM00564
HMMPANTHER:PTHR13954
PFSCAN:PS51392
PFAM:PF06479
INTERPRO:IPR010513
INTERPRO:IPR038357
HMMPANTHER:PTHR13954:SF15
INTERPRO:IPR033523