WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP59393 Name  Ppa-MTM-5
Molecular Weight (kDa)  217.7 Length  1934
Organism  Pristionchus pacificus MD5 Checksum  06f40eefbf87c904d501f1a63bd761d5
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1934
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA27916 PPA27916   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

26 Motifs

WormBase ID
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFAM:PF00169
SUPERFAMILY:SSF52799
INTERPRO:IPR029021
INTERPRO:IPR043153
SMART:SM00799
PFSCAN:PS50211
PFAM:PF02141
INTERPRO:IPR001194
SMART:SM00801
INTERPRO:IPR005112
HMMPANTHER:PTHR10807
PFAM:PF06602
PFSCAN:PS51339
INTERPRO:IPR030564
INTERPRO:IPR010569
SMART:SM00568
PFAM:PF02893
INTERPRO:IPR004182
INTERPRO:IPR022096
PFAM:PF12335
HMMPANTHER:PTHR10807:SF109