WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP55894 Name  Ppa-SQV-2
Molecular Weight (kDa)  154.9 Length  1402
Organism  Pristionchus pacificus MD5 Checksum  93c9136e9beb94d19e0115c3a3240acf
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1402
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA28178 PPA28178   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

24 Motifs

WormBase ID
PFAM:PF00179
INTERPRO:IPR000608
SUPERFAMILY:SSF54495
INTERPRO:IPR016135
PFSCAN:PS50127
SMART:SM00212
PFSCAN:PS50005
SUPERFAMILY:SSF48452
PFSCAN:PS50293
INTERPRO:IPR011990
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFAM:PF00515
INTERPRO:IPR001440
SMART:SM00028
INTERPRO:IPR019734
PFAM:PF07933
INTERPRO:IPR012466
HMMPANTHER:PTHR24068
PFAM:PF01762
INTERPRO:IPR002659
HMMPANTHER:PTHR24068:SF135
PFAM:PF16546
INTERPRO:IPR032374