WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP72532 Name  Ppa-HIM-6
Molecular Weight (kDa)  196.2 Length  1763
Organism  Pristionchus pacificus MD5 Checksum  98edd96b7b64fb1c3e622c0257dde545
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1763
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA37538 PPA37538   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

30 Motifs

WormBase ID
INTERPRO:IPR036388
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
SUPERFAMILY:SSF46785
INTERPRO:IPR036390
SCANPROSITE:PS00690
INTERPRO:IPR014001
SMART:SM00490
SMART:SM00487
PFAM:PF00271
PFAM:PF00270
INTERPRO:IPR001650
INTERPRO:IPR011545
PFSCAN:PS51194
PFSCAN:PS51192
HMMPANTHER:PTHR13710
PFAM:PF16124
INTERPRO:IPR032284
INTERPRO:IPR004589
HMMPANTHER:PTHR13710:SF105
TIGRFAM:TIGR00614
SMART:SM00341
PFSCAN:PS50967
PFAM:PF00570
SUPERFAMILY:SSF47819
INTERPRO:IPR002121
INTERPRO:IPR010997
INTERPRO:IPR018982
PFAM:PF09382
SMART:SM00956