WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP58905 Name  Ppa-SCA-1
Molecular Weight (kDa)  115.9 Length  1064
Organism  Pristionchus pacificus MD5 Checksum  46587e6d02f5ff407cb8b11b2a9f24c7
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1064
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA37574 PPA37574   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

26 Motifs

WormBase ID
PRINTS:PR00119
INTERPRO:IPR023299
SUPERFAMILY:SSF81653
SUPERFAMILY:SSF81660
INTERPRO:IPR001757
SUPERFAMILY:SSF56784
SUPERFAMILY:SSF81665
INTERPRO:IPR023298
INTERPRO:IPR023214
INTERPRO:IPR008250
INTERPRO:IPR036412
TIGRFAM:TIGR01494
SCANPROSITE:PS00154
PFAM:PF13246
INTERPRO:IPR004014
PFAM:PF00690
PFAM:PF00122
SMART:SM00831
INTERPRO:IPR005782
PFAM:PF00689
HMMPANTHER:PTHR42861:SF18
HMMPANTHER:PTHR42861
TIGRFAM:TIGR01116
PFAM:PF08282
INTERPRO:IPR006068
INTERPRO:IPR030332