WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP51962 Name  Ppa-LEX-1
Molecular Weight (kDa)  178.6 Length  1588
Organism  Pristionchus pacificus MD5 Checksum  ef2e614f721c91d5cb89cc3802861391
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1588
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA39781 PPA39781   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

27 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR003593
SMART:SM00382
SUPERFAMILY:SSF57667
INTERPRO:IPR036236
PFAM:PF16835
INTERPRO:IPR031781
PFSCAN:PS50171
SMART:SM00451
INTERPRO:IPR003604
PFAM:PF12874
SMART:SM01050
PFSCAN:PS50014
PRINTS:PR00503
SMART:SM00297
PFAM:PF00439
SUPERFAMILY:SSF47370
INTERPRO:IPR001487
INTERPRO:IPR036427
PFAM:PF17862
PFAM:PF00004
INTERPRO:IPR003959
INTERPRO:IPR041569
SCANPROSITE:PS00674
HMMPANTHER:PTHR23069:SF0
HMMPANTHER:PTHR23069