WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP58849 Name  PPA39827
Molecular Weight (kDa)  248.9 Length  2245
Organism  Pristionchus pacificus MD5 Checksum  38bfa28ae66c076c13163f5794aa0ede
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
2245
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA39827 PPA39827   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

31 Motifs

WormBase ID
SUPERFAMILY:SSF51905
INTERPRO:IPR036188
INTERPRO:IPR013785
PFAM:PF07992
PIRSF:PIRSF000187
HMMPANTHER:PTHR11938
HMMPANTHER:PTHR11938:SF133
INTERPRO:IPR006005
INTERPRO:IPR002932
INTERPRO:IPR012220
INTERPRO:IPR006982
INTERPRO:IPR028261
INTERPRO:IPR017932
INTERPRO:IPR036485
PFAM:PF14691
PRINTS:PR00419
INTERPRO:IPR023753
TIGRFAM:TIGR01317
SUPERFAMILY:SSF56235
PFAM:PF01493
PFAM:PF01645
PFAM:PF04898
INTERPRO:IPR029055
PFAM:PF00310
PFSCAN:PS51278
INTERPRO:IPR002489
SUPERFAMILY:SSF69336
INTERPRO:IPR009051
SUPERFAMILY:SSF51395
SUPERFAMILY:SSF46548