WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0000404 heteroduplex DNA loop binding GO

Namespace  molecular_function Obsolete  false
Description  Binding to a DNA segment containing a loop. A loop occurs when DNA contains a large insertion or deletion that causes a region of unpaired single-stranded DNA to loop out, while the rest of the DNA is in a paired double-stranded configuration.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

9 Parents

Identifier Name Description
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003676 nucleic acid binding Binding to a nucleic acid.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0003690 double-stranded DNA binding Binding to double-stranded DNA.
GO:0000217 DNA secondary structure binding Binding to a DNA secondary structure element such as a four-way junction, a bubble, a loop, Y-form DNA, or a double-strand/single-strand junction.
GO:0032135 DNA insertion or deletion binding Binding to a double-stranded DNA region containing an insertion or a deletion.
GO:0000404 heteroduplex DNA loop binding Binding to a DNA segment containing a loop. A loop occurs when DNA contains a large insertion or deletion that causes a region of unpaired single-stranded DNA to loop out, while the rest of the DNA is in a paired double-stranded configuration.
GO:0030983 mismatched DNA binding Binding to a double-stranded DNA region containing one or more mismatches.

8 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0032135 GO:0000404
is_a GO:0000217 GO:0000404
is_a GO:0003690 GO:0000404
is_a GO:0030983 GO:0000404
is_a GO:0005488 GO:0000404
is_a GO:0003674 GO:0000404
is_a GO:0003677 GO:0000404
is_a GO:0003676 GO:0000404

1 Synonyms

Name Type
loop DNA binding synonym