WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0004834 tryptophan synthase activity GO

Namespace  molecular_function Obsolete  false
Description  Catalysis of the reaction: L-serine + (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O.

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

1 Ontology Annotations

Annotation Extension Qualifier
  enables

40 Parents

Identifier Name Description
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0008152 metabolic process A cellular process consisting of the biochemical pathways by which a living organism transforms chemical substances. This includes including anabolism (biosynthetic process) and catabolism (catabolic process). Metabolic processes includes the transformation of small molecules, as well macromolecular processes such as DNA repair and replication, protein synthesis and degradation.
GO:0009058 biosynthetic process A cellular process consisting of the biochemical pathways by which a living organism synthesizes chemical substances. This typically represents the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0046394 carboxylic acid biosynthetic process The chemical reactions and pathways resulting in the formation of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
GO:0043436 oxoacid metabolic process The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons).
GO:0006082 organic acid metabolic process The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage.
GO:0044281 small molecule metabolic process The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule.
GO:0044283 small molecule biosynthetic process The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule.
GO:0016053 organic acid biosynthetic process The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage.
GO:1901605 alpha-amino acid metabolic process The chemical reactions and pathways involving an alpha-amino acid.
GO:0006520 amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
GO:0170033 L-amino acid metabolic process The chemical reactions and pathways involving an L-amino acid.
GO:0170034 L-amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of L-amino acids, the L-enantiomers of amino acids.
GO:0009073 aromatic amino acid family biosynthetic process The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO:0170038 proteinogenic amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.
GO:1901607 alpha-amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of an alpha-amino acid.
GO:0170039 proteinogenic amino acid metabolic process The chemical reactions and pathways involving any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.
GO:0008652 amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
GO:0009072 aromatic amino acid metabolic process The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of erythrose 4-phosphate/phosphoenolpyruvate family amino acid.
GO:0000162 L-tryptophan biosynthetic process The chemical reactions and pathways resulting in the formation of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; L-tryptophan is synthesized from chorismate via anthranilate.
GO:0006568 L-tryptophan metabolic process The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
GO:0046219 indolalkylamine biosynthetic process The chemical reactions and pathways resulting in the formation of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.
GO:0042401 biogenic amine biosynthetic process The chemical reactions and pathways occurring at the level of individual cells resulting in the formation of any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters.
GO:0006586 indolalkylamine metabolic process The chemical reactions and pathways involving indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.

39 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0016836 GO:0004834
part of GO:0000162 GO:0004834
part of GO:0006576 GO:0004834
part of GO:0009987 GO:0004834
is_a GO:0003824 GO:0004834
part of GO:0009309 GO:0004834
part of GO:0009308 GO:0004834
is_a GO:0016829 GO:0004834
part of GO:0009073 GO:0004834
part of GO:0044283 GO:0004834
part of GO:0009072 GO:0004834
part of GO:1901607 GO:0004834
part of GO:0006082 GO:0004834
part of GO:1901605 GO:0004834
part of GO:0043436 GO:0004834
part of GO:0042401 GO:0004834
part of GO:0009058 GO:0004834
part of GO:0006586 GO:0004834
part of GO:0006520 GO:0004834
part of GO:0006568 GO:0004834
part of GO:0170039 GO:0004834
part of GO:0044281 GO:0004834
is_a GO:0003674 GO:0004834
part of GO:0019752 GO:0004834
part of GO:0042430 GO:0004834
part of GO:0016053 GO:0004834
part of GO:0046219 GO:0004834
part of GO:0046394 GO:0004834
part of GO:0008150 GO:0004834
part of GO:0042435 GO:0004834

6 Synonyms

Name Type
tryptophan synthetase activity synonym
indoleglycerol phosphate aldolase activity synonym
L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming] synonym
L-serine hydro-lyase (adding indoleglycerol-phosphate) synonym
tryptophan desmolase activity synonym
L-tryptophan synthetase activity synonym