WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0005721 pericentric heterochromatin GO

Namespace  cellular_component Obsolete  false
Description  Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

4 Ontology Annotations

Annotation Extension Qualifier
  located_in
  located_in
  located_in
  located_in

13 Parents

Identifier Name Description
GO:0005575 cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).
GO:0005622 intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm.
GO:0110165 cellular anatomical structure A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0043228 membraneless organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes.
GO:0043232 intracellular membraneless organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
GO:0000785 chromatin The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
GO:0005694 chromosome A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
GO:0000775 chromosome, centromeric region The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
GO:0098687 chromosomal region Any subdivision of a chromosome along its length.
GO:0000792 heterochromatin A compact and highly condensed form of chromatin that is refractory to transcription.
GO:0005721 pericentric heterochromatin Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).

18 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
part of GO:0000775 GO:0005721
part of GO:0000775 GO:0005721
is_a GO:0000792 GO:0005721
is_a GO:0000792 GO:0005721
part of GO:0110165 GO:0005721
part of GO:0005622 GO:0005721
part of GO:0098687 GO:0005721
is_a GO:0000785 GO:0005721
part of GO:0043226 GO:0005721
is_a GO:0110165 GO:0005721
part of GO:0043232 GO:0005721
is_a GO:0005575 GO:0005721
part of GO:0005694 GO:0005721
part of GO:0043229 GO:0005721
part of GO:0043228 GO:0005721
part of GO:0005575 GO:0005721
is_a GO:0005721 GO:0005722
is_a GO:0005721 GO:0005723

12 Synonyms

Name Type
centromeric heterochromatin synonym
centric heterochromatin synonym
chromosome, centromeric inner repeat region synonym
chromosome, centric outer repeat region synonym
nuclear centric heterochromatin synonym
chromosome, centromeric outer repeat region synonym
nuclear pericentric heterochromatin synonym
nuclear cluster synonym
GO:0031618 alt_id
GO:0002137 alt_id
GO:0062199 alt_id
GO:0034507 alt_id