WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042516 Gene Name  CBG24392
Sequence Name  ? CBG24392 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Ubiquitin-conjugating enzyme; Ubiquitin-conjugating enzyme E2; and Ubiquitin-conjugating enzyme/RWD-like. Is an ortholog of C. elegans ubc-19. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24392.1 CBG24392.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24392 CBG24392   [unknown]

0 RNAi Result

122 Allele

Public Name
WBVar00134201
WBVar00134202
WBVar00134203
WBVar00134204
WBVar00134205
WBVar00134200
WBVar00134168
WBVar00134169
WBVar00134170
WBVar00134171
WBVar00134172
WBVar00134173
WBVar00134174
WBVar00134175
WBVar00134176
WBVar00134177
WBVar00134178
WBVar00134179
WBVar00134180
WBVar00134181
WBVar00134182
WBVar00134183
WBVar00134184
WBVar00134185
WBVar00134186
WBVar00134187
WBVar00134188
WBVar00134189
WBVar00134146
WBVar00134147

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ubc-19, CCCGTTTGGATCGCGAAAAACACGGAATCGAACCTTTGGATTTGAGCATAATTTCAGTAG, WBGene00039652   Expr1061596 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term