WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0000717 gene expression variant

Description  Variations in the processes that convert a gene's sequence into a mature gene product or products (proteins or RNA), compared to control.

27 RNAi

WormBase ID
WBRNAi00078101
WBRNAi00077540
WBRNAi00110402
WBRNAi00110401
WBRNAi00108173
WBRNAi00081977
WBRNAi00108176
WBRNAi00081976
WBRNAi00110413
WBRNAi00110416
WBRNAi00110415
WBRNAi00093537
WBRNAi00107639
WBRNAi00093539
WBRNAi00093538
WBRNAi00107643
WBRNAi00108471
WBRNAi00108470
WBRNAi00108473
WBRNAi00108472
WBRNAi00101989
WBRNAi00069902
WBRNAi00101988
WBRNAi00101990
WBRNAi00077085
WBRNAi00094588
WBRNAi00069857

2 RNAi Not Observed

WormBase ID
WBRNAi00097527
WBRNAi00065442

11 Children

Identifier Name Description
WBPhenotype:0000306 transgene expression variant Any variation in the characteristic expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to control animals.
WBPhenotype:0000112 protein expression variant Variations in the biogenesis and stability of protein molecules compared to control.
WBPhenotype:0001857 pathogen induced gene expression variant Gene expression of an animal is not influenced by the exposure to disease causing agents in the same manner as control animals.
WBPhenotype:0000718 dosage compensation variant Variations in the process of normalizing the expression level of X-linked genes between XX and XO animals compared to control.
WBPhenotype:0001838 drug induced gene expression variant Gene expression of an animal is not influenced by drug treatment in the same manner as control animals.
WBPhenotype:0000113 RNA expression variant Variations in the biogenesis and stability of any class of RNA molecules (rRNAs, miRNAs, tRNAs etc) compared to control.
WBPhenotype:0002534 antimicrobial gene expression variant Animals exhibit variations in the expression of one or more known, endogenous, antimicrobial genes, compared to controls.
WBPhenotype:0000111 pattern of gene expression variant Any variation in the cellular or subcellular distribution of a gene product compared to that observed in control animals.
WBPhenotype:0002575 gene expression level abnormal Animals exhibit abnormal gene expression levels, compared to control.
WBPhenotype:0001861 environmental stimuli induced gene expression variant Gene expression of an animal is not influenced by environmental changes in the same manner as control animals.
WBPhenotype:0002574 gene expression level variation abnormal Animals exhibit abnormal amounts of variation in gene expression level between individual animals, compared to control.

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Parents

Identifier Name Description
WBPhenotype:0001696 biosynthesis variant Animals exhibit variations in the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones compared to control.

60 Phenotype Allele

Public Name
q224
n4622
sv34
tm299
tm872
ok1448
mn553
n1127
gk208
ok559
pk924
bc212
e428
ok3125
e1370
e1368
m596
ok430
oy9
n745
n2990
n3423
n389
nr2041
tm1618
n1046
ok600
ok976
zu67
zu129

45 Phenotype Allele Not Observed

Public Name
tm238
tm413
tm440
tm456
tm801
tm853
tm866
e1996
ok558
me4
e164
e184
ad467
m14
e1385
e1372
e1880
gk186
n389
ku1
e1777
ky634
tm1896
ok888
mu220
gk133
e419
ok406
tm1923
ok284

1 Synonyms

Name Type
gene expression abnormal