WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040826 Gene Name  Cbr-tub-2
Sequence Name  ? CBG22218 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Tubby, C-terminal; WD40/YVTN repeat-like-containing domain superfamily; Tub family; WD40 repeat; and Tubby-like, C-terminal. Is an ortholog of C. elegans tub-2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22218.1 CBG22218.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22218 CBG22218   [unknown]

0 RNAi Result

4 Allele

Public Name
WBVar00131244
WBVar00131245
WBVar00131242
WBVar00131243

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-tub-2, CAAAACAAGTTCTGCAATTTGGCAGAATCGAAGGCGGCGCCTATACACTCGACTTCCGAT, WBGene00040826   Expr1054108 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term