WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040490 Gene Name  Cbr-gly-7
Sequence Name  ? CBG21807 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Nucleotide-diphospho-sugar transferases; Glycosyltransferase 2-like; Glycosyl transferase family 2; Ricin B-like lectins; Ricin-type beta-trefoil lectin domain; and Ricin B, lectin domain. Is an ortholog of C. elegans gly-7. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21807.1 CBG21807.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21807 CBG21807   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00130481
WBVar00056173
WBVar00130480
WBVar00130483
WBVar00130482
WBVar00130485
WBVar00130484
WBVar00130487
WBVar00130486

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-gly-7, AATCAGTTGATTCGACTCAATGTTCAAGGACAAATGGCACAAGGAGAGTGGTGTTTGACG, WBGene00040490   Expr1069583 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term