WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00005155 Gene Name  srf-5
Brief Description  srf-5 was identified as a mutation that alters the surface antigenicity of the cuticle in C. elegans; srf-5 mutations show altered binding to antibodies raised against the cuticles of wild-type worms, and lectins like wheat germ agglutinin; srf-5 mutants are resistant to infection by the nematode-specific pathogen, Microbacterium nematophilum and do not show the tail-swelling response to infection; srf-5 mutants also show an altered response in the form of increased susceptibility to nematophagous fungi. Organism  Caenorhabditis elegans
Automated Description  Expressed in intestine; pharynx; rectal valve cell; and seam cell. Used to study bacterial infectious disease. Genetic Position  X :11.603 ±1.10119
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

0 Synonyms

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
dv32
dv28
dv40
dv18
e2697
gk424525
ct114
ct115

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr16441 Strong srf-5 expression was observed in seam cells, as well as weaker expression in the intestine, rectal valve, and pharynx.  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term