WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0001382 protein modification variant

Description  Variations in the covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications), compared to control. This includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).

3 RNAi

WormBase ID
WBRNAi00107855
WBRNAi00098380
WBRNAi00106175

0 RNAi Not Observed

9 Children

Identifier Name Description
WBPhenotype:0001349 protein phosphorylation variant Variations in the processes that incorporate phosphate groups to one or more amino acids within a protein, compared to control.
WBPhenotype:0001383 protein methylation variant Variations in the processes that incorporate methyl groups to one or more amino acids within a protein, compared to control.
WBPhenotype:0001865 protein ubiquitination variant Variations in the process by which one or more ubiquitin moieties are added to a protein, compared to control.
WBPhenotype:0002429 protein glycosylation variant Animals exhibit variations in the degree to which some proteins are glycosylated, compared to controls.
WBPhenotype:0002420 chromatin modification variant Animals exhibit variations in the nature and/or extent of chromatin modification, including but not limited to acetylation and/or methylation of histones, compared to controls.
WBPhenotype:0002272 protein carbonylation variant Animals exhibit variations in the covalent modification of one or more native amino acid side chains in proteins to carbonyl derivatives such as an aldehyde or ketone.
WBPhenotype:0002362 protein sumoylation variant Variations in the process by which one or more SUMO moieties are added to a protein, compared to control.
WBPhenotype:0001874 protein neddylation variant Any variation in the conjugation of the ubiquitin-like protein Nedd8 to another protein compared to control.
WBPhenotype:0001917 protein acetylation variant Variations in the processes that incorporate acetyl groups to one or more amino acids within a protein, compared to control. An acetyl group is CH3CO-.

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Parents

Identifier Name Description
WBPhenotype:0001644 protein metabolism variant Animals exhibit variations in any process that involves the maintenance, biosynthesis or accumulation of proteins in the organism compared to control.
WBPhenotype:0000112 protein expression variant Variations in the biogenesis and stability of protein molecules compared to control.

10 Phenotype Allele

Public Name
ad467
ok430
tm1046
gk357
it129
ok259
et15
et18
ok2710
ok1207

1 Phenotype Allele Not Observed

Public Name
it129

1 Synonyms

Name Type
protein modification abnormal