WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0000027 organism metabolism processing variant

Description  Variations in the chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances compared to control.

10 RNAi

WormBase ID
WBRNAi00110146
WBRNAi00078079
WBRNAi00110147
WBRNAi00078223
WBRNAi00115624
WBRNAi00086935
WBRNAi00078225
WBRNAi00086934
WBRNAi00078224
WBRNAi00078078

2 RNAi Not Observed

WormBase ID
WBRNAi00115623
WBRNAi00078077

24 Children

Identifier Name Description
WBPhenotype:0000463 metabolic pathway variant Animals exhibit variations in processes that are responsible for chemical changes compared to control animals. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
WBPhenotype:0000727 enzyme activity variant Any variation in the function of naturally occurring macromolecular substances known as enzymes compared to control. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein (can include an RNA component).
WBPhenotype:0001574 ATP levels variant Animals exhibit variations in the cellular levels of Adenosine-5'-triphosphate (ATP), compared to control. ATP is a nucleotide that plays a versatile role in cell biology.
WBPhenotype:0000508 nonsense mRNA accumulation Animals exhibit a decrease in the regulated breakdown of mRNA transcripts in which an amino-acid codon has changed to a premature stop codon and the 3 prime end is not protected by a poly(A) tail.
WBPhenotype:0000507 acetylcholine levels variant Animals exhibit variations in the amount of acetylcholine compared to control animals at a defined stage. Acetylcholine is the acetic acid ester of the organic base choline.
WBPhenotype:0002381 pheromone production variant Animals exhibit variations in the amount and/or quality of pheromone produced compared to control animals at a defined stage.
WBPhenotype:0001369 protein interaction variant Variations in the selective and non-covalent physical association between two or more proteins, or a protein and nucleic acid/macromolecular complex, compared to control.
WBPhenotype:0000552 GABA levels variant Animals exhibit variations in the amount of GABA compared to control animals at a defined stage.
WBPhenotype:0000725 lipid metabolism variant Animals exhibit variations in any process that involves the maintenance, biosynthesis or accumulation of an internal store of lipid within the organism or cell compared to control.
WBPhenotype:0001518 biogenic amine physiology variant Any variation in the levels and/or localization of biogenic amines compared to control animals.
WBPhenotype:0002072 carbohydrate metabolism variant Animals exhibit variations in any process that involves the maintenance, biosynthesis or accumulation of an internal store of carbohydrates within the organism or cell compared to control.
WBPhenotype:0000221 neurotransmitter metabolism variant Animals exhibit variations in any chemical reaction or pathway involving neurotransmitters compared to control animals. Neurotransmitters are any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.
WBPhenotype:0001835 energy expenditure variant Variations in the amount of energy consumed by an organism compared to control. Energy expenditure is often determined by assaying oxygen consumption.
WBPhenotype:0000122 post translational processing variant Any variation in the posttranslational modification of a protein (which may include cleavage of peptide bonds) leading to the attainment of the full functional capacity of the protein compared to control.
WBPhenotype:0001843 hormone metabolism variant Animals exhibit variations in any process that involves the degradation, biosynthesis or accumulation of hormones within the organism compared to control. Hormones are naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone.
WBPhenotype:0002400 glucose intolerant Animals do not live or live poorly in the presence of glucose concentrations that normally do not have an effect on control animals.
WBPhenotype:0002205 hypersensitive to galactose Animals exhibit negative effects on growth, development, or metabolism when exposed to a galactose-rich diet, compared to control animals.
WBPhenotype:0002206 galactose metabolism variant Animals process dietary galactose differently than control animals, these differences can result in increased and or decreased levels of intermediary galactose metabolites.
WBPhenotype:0001892 glycogen levels variant Any variation in the levels of the polymerized form of glucose throughout the body of the animal as compared to controls.
WBPhenotype:0001757 neuropeptide metabolism variant Animals exhibit variations in any process that involves the maintenance, biosynthesis or accumulation of signalling peptides in the organism compared to control.
WBPhenotype:0002525 diet response variant Animals exhibit variations in their response to diet, compared to controls.
WBPhenotype:0001899 glutathione levels variant Animals exhibit variations in the amount of glutathione compared to control animals at a defined stage. Glutathione, the tripeptide glutamylcysteinylglycine, acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.
WBPhenotype:0002480 heme levels variant Animals exhibit variations in the amount of heme compared to control animals. Heme is any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
WBPhenotype:0002008 glycation variant Animals exhibit variations in the non-enzymatic glycosylation process of attaching a protein or lipid to a sugar molecule, compared to control animals.

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Parents

Identifier Name Description
WBPhenotype:0000577 organism homeostasis metabolism variant Variations in the chemical reactions and pathways involved in the maintenance of a steady-state at the level of the organism compared to control.

4 Phenotype Allele

Public Name
eg33
gc47
tm2149
tm3120

0 Phenotype Allele Not Observed

1 Synonyms

Name Type
organism metabolism processing abnormal