WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0001644 protein metabolism variant

Description  Animals exhibit variations in any process that involves the maintenance, biosynthesis or accumulation of proteins in the organism compared to control.

36 RNAi

WormBase ID
WBRNAi00084368
WBRNAi00084359
WBRNAi00084360
WBRNAi00084351
WBRNAi00084222
WBRNAi00084363
WBRNAi00084348
WBRNAi00084350
WBRNAi00084349
WBRNAi00084352
WBRNAi00084354
WBRNAi00084353
WBRNAi00084356
WBRNAi00084355
WBRNAi00084358
WBRNAi00084357
WBRNAi00084362
WBRNAi00084361
WBRNAi00084364
WBRNAi00084366
WBRNAi00084365
WBRNAi00084367
WBRNAi00084370
WBRNAi00084369
WBRNAi00084372
WBRNAi00084371
WBRNAi00084374
WBRNAi00084373
WBRNAi00084376
WBRNAi00084375

0 RNAi Not Observed

9 Children

Identifier Name Description
WBPhenotype:0001645 protein degradation variant Variations in the chemical reactions and pathways resulting in the directed breakdown of a protein (via the destruction of its native, active configuration) compared to control.
WBPhenotype:0001864 protein transport variant Any variation in the processes that modulate the frequency, rate or extent of the directed movement of a protein into, out of, within or between cells by means of some external agent such as a transporter or pore compared to control.
WBPhenotype:0001719 unfolded protein response variant Animals exhibit variations in any of the series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) and or the mitochondria, compared to control. One such response is the increase in expression of chaperones.
WBPhenotype:0000121 translation variant Variations in the chemical reactions and pathways resulting in the formation of a protein, compared to control.
WBPhenotype:0001806 protein stabilization variant Any variation in the ability of a protein to resist disintegration via chemical or physical modifications compared to control.
WBPhenotype:0001382 protein modification variant Variations in the covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications), compared to control. This includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
WBPhenotype:0002010 protein turnover variant The dynamics of the replacement of old proteins by newly synthesized or modified proteins varies from that of control animals. This phenotype is often measured by fluorescence recovery after photobleaching (FRAP).
WBPhenotype:0002009 proteasome core activity variant Animals exhibit variations from controls in their protein degradation machinery, which functions through the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
WBPhenotype:0001486 unfolded protein accumulation Animals accumulate unfolded proteins in the endoplasmic reticulum (ER) and or the mitochondria.

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Parents

Identifier Name Description
WBPhenotype:0000463 metabolic pathway variant Animals exhibit variations in processes that are responsible for chemical changes compared to control animals. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
WBPhenotype:0000585 cell homeostasis metabolism variant Variations in the chemical reactions and pathways involved in the maintenance of a steady-state at the level of the cell compared to control.

12 Phenotype Allele

Public Name
qa201
bp677
bp424
bp405
bp425
bp623
ok705
j1
tm3420
ok667
tm3425
bp450

3 Phenotype Allele Not Observed

Public Name
bp287
bp444
bp316

1 Synonyms

Name Type
protein metabolism abnormal