WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0000207 defecation cycle variant

Description  Any variation in the stereotyped sequence of muscle contractions that result in defecation over a fixed time period compared to control .

13 RNAi

WormBase ID
WBRNAi00112228
WBRNAi00098368
WBRNAi00097001
WBRNAi00097002
WBRNAi00062849
WBRNAi00103064
WBRNAi00103066
WBRNAi00062776
WBRNAi00062777
WBRNAi00116338
WBRNAi00062778
WBRNAi00062784
WBRNAi00084188

6 RNAi Not Observed

WormBase ID
WBRNAi00082843
WBRNAi00102909
WBRNAi00062781
WBRNAi00065142
WBRNAi00062782
WBRNAi00062780

6 Children

Identifier Name Description
WBPhenotype:0000209 short defecation cycle The mean time between the onset of the defecation motor program is shorter than that observed for control animals.
WBPhenotype:0000246 defecation cycle variable length Animals exhibit variation in the time of onset of the defecation motor program significantly greater than that observed for control animals.
WBPhenotype:0000208 long defecation cycle The mean time between the onset of the defecation motor program is greater than that observed for control animals.
WBPhenotype:0001791 defecation cycle temperature compensation variant Animals exhibit variations in temperature dependent differences in the length of their defecation cycle. In C. elegans the length of the cycle is the same at different temperatures, showing temperature compensation.
WBPhenotype:0000564 echo defecation cycle Muscle contractions that make up the defecation motor program are repeated before the onset of the next cycle unlike in control animals.
WBPhenotype:0000410 no defecation cycle Animals lack the stereotyped sequence of muscle contractions that result in defecation over a fixed time period compared to control.

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Parents

Identifier Name Description
WBPhenotype:0000650 defecation variant Animals exhibit variations in the processes involved in eliminating gut contents compared to control animals. In C. elegans the sequence of events during defecation includes posterior body contraction (pBoc), relaxation, anterior body contraction (aBoc), expulsion of gut contents by enteric muscle contraction (Emc) and opening of anus (Exp), and intercycle period (Wormatlas).

15 Phenotype Allele

Public Name
qm162
qm30
sa47
sa92
sa200
tm4837
qm169
qm151
qm159
qm164
qm152
qm158
n487
n986
e2519

87 Phenotype Allele Not Observed

Public Name
n4102
n4640
n4255
n4475
n4106
n4114
n4601
n4520
e912
n4104
gk175
n4570
n4126
n4115
n4899
n4638
n4315
n4635
sy290
sy327
sy326
n4286
n4797
sy605
tm394
tm725
n4637
n4540
n4505
n4473

2 Synonyms

Name Type
defecation cycle abnormal  
Dec