WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00026877 Gene Name  CBG04143
Sequence Name  ? CBG04143 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Sterile alpha motif/pointed domain superfamily; SH3-like domain superfamily; Sterile alpha motif domain; and SAM domain (Sterile alpha motif). Is an ortholog of C. elegans C46H3.2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG04143.1 CBG04143.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG04143 CBG04143   [unknown]

0 RNAi Result

6 Allele

Public Name
WBVar00109029
WBVar00109030
WBVar00109031
WBVar00109032
WBVar00001919
WBVar00001227

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG04143, GCTGGATTTGCAATGGGAAGATTTCGAGGACATCGGTGTTAAGCGATTGGGTCATTTAAA, WBGene00026877   Expr1068712 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term