WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0032129 histone H3K9 deacetylase activity, hydrolytic mechanism GO

Namespace  molecular_function Obsolete  false
Description  Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

13 Parents

Identifier Name Description
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc.
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds.
GO:0140096 catalytic activity, acting on a protein Catalytic activity that acts to modify a protein.
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.
GO:0019213 deacetylase activity Catalysis of the hydrolysis of an acetyl group from a substrate molecule.
GO:0160215 deacylase activity Catalysis of the reaction: R-CO-X + H2O = R-COOH + HX, hydrolysis of an acyl group or groups from a substrate molecule.
GO:0033558 protein lysine deacetylase activity Catalysis of the reaction: Removal of an acetyl group from a lysine residue in a protein.
GO:0004407 histone deacetylase activity Removal of an acetyl group from a lysine residue in a histone.
GO:0141050 histone H3K deacetylase activity Removal of an acetyl group from a lysine residue in a histone H3.
GO:0141221 histone deacetylase activity, hydrolytic mechanism Catalysis of the reaction: H2O + N6-acetyl-L-lysyl-[histone] = acetate + L-lysyl-[histone].
GO:0032129 histone H3K9 deacetylase activity, hydrolytic mechanism Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.

12 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0141221 GO:0032129
is_a GO:0141050 GO:0032129
is_a GO:0003674 GO:0032129
is_a GO:0033558 GO:0032129
is_a GO:0016810 GO:0032129
is_a GO:0019213 GO:0032129
is_a GO:0140096 GO:0032129
is_a GO:0016787 GO:0032129
is_a GO:0004407 GO:0032129
is_a GO:0003824 GO:0032129
is_a GO:0016811 GO:0032129
is_a GO:0160215 GO:0032129

3 Synonyms

Name Type
histone H3-K9 deacetylase activity synonym
histone deacetylase activity (H3-K9 specific) synonym
histone H3K9 deacetylase activity synonym