WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039205 Gene Name  Cbr-phlp-2
Sequence Name  ? CBG20149 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Protein phosphatase 2C; PPM-type phosphatase domain; Leucine-rich repeat; Leucine-rich repeat, typical subtype; PPM-type phosphatase domain superfamily; Leucine rich repeat; and Leucine-rich repeat domain superfamily. Is an ortholog of C. elegans phlp-2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20149.1 CBG20149.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20149 CBG20149   [unknown]

0 RNAi Result

16 Allele

Public Name
WBVar00049294
WBVar00049274
WBVar00049279
WBVar00049284
WBVar00049289
WBVar00128257
WBVar00028572
WBVar00028577
WBVar00028582
WBVar00028552
WBVar00028587
WBVar00028557
WBVar00028592
WBVar00028562
WBVar00028597
WBVar00028567

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG20149, ATTCAATGAAACGCGAGATTTGTTGAGCAAATCGCTGAAGTTGAGCCCACCGAATACGGT, WBGene00039205   Expr1056499 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term