WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023966 Gene Name  Cbr-lnkn-1
Sequence Name  ? CBG00593 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: FG-GAP repeat; FG-GAP-like repeat; and T-cell immunomodulatory protein. Is an ortholog of C. elegans lnkn-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00593.1 CBG00593.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00593 CBG00593   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00003334
WBVar00003339
WBVar00003324
WBVar00003329
WBVar00003319
WBVar00063403
WBVar00063388
WBVar00063393
WBVar00063398

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-tag-256, TGCTTCTGATGGTTGTTGTATTTTTGCACTATCGGGAGAAAAAAGAAGATCGCTACGAGC, WBGene00023966   Expr1055445 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term