WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032898 Gene Name  Cbr-rme-8
Sequence Name  ? CBG11852 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: DnaJ domain; Chaperone J-domain superfamily; Armadillo-type fold; GYF domain 2; and Armadillo-like helical. Is an ortholog of C. elegans rme-8. In C. elegans, rme-8 is involved in several processes, including mechanosensory behavior; positive regulation of nematode male tail tip morphogenesis; and vesicle-mediated transport. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11852b.1 CBG11852b.1   [unknown]
Transcript:CBG11852a.1 CBG11852a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11852a CBG11852a   [unknown]
CDS:CBG11852b CBG11852b   [unknown]

0 RNAi Result

5 Allele

Public Name
WBVar00117937
WBVar00117939
WBVar00117938
WBVar00117940
WBVar00117941

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-rme-8, GCGATTTTGGATTTGAAAGTGGGAACGAAGATTCAGGAGATACTTGAGAAGAGCCCCATT, WBGene00032898   Expr1058292 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term