WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032542 Gene Name  CBG11426
Sequence Name  ? CBG11426 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin fold. Is an ortholog of C. elegans clec-226 and clec-262. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11426.1 CBG11426.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11426 CBG11426   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00117117
WBVar00117119
WBVar00117118
WBVar00117120
WBVar00117122
WBVar00117121
WBVar00117124
WBVar00117123

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG11426, GTCCCAGGAATTACTAGTTGCATTCAAAGTCGTTACAAATATCTGTCCCGCTATTGCGGA, WBGene00032542   Expr1059609 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term