WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034550 Gene Name  Cbr-eps-8
Sequence Name  ? CBG13858 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Epidermal growth factor receptor kinase substrate 8-like; SAM domain; Tensin/EPS8 phosphotyrosine-binding domain; Phosphotyrosine-binding domain; PTB/PI domain; Sterile alpha motif/pointed domain superfamily; SH3-like domain superfamily; SAM domain (Sterile alpha motif); SH3 domain; and PH-like domain superfamily. Is an ortholog of C. elegans eps-8. In C. elegans, eps-8 is involved in several processes, including anatomical structure morphogenesis; barbed-end actin filament capping; and supramolecular fiber organization. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13858a.1 CBG13858a.1   [unknown]
Transcript:CBG13858b.1 CBG13858b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13858a CBG13858a   [unknown]
CDS:CBG13858b CBG13858b   [unknown]

0 RNAi Result

11 Allele

Public Name
WBVar00057904
WBVar00057909
WBVar00057894
WBVar00057899
WBVar00016007
WBVar00026414
WBVar00026399
WBVar00026419
WBVar00026404
WBVar00026424
WBVar00026409

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-eps-8, GTGCAAGAACATGCATCAGAGAGTTGGATATGTTCCACATACGATTTTGTCAATGGTGCC, WBGene00034550   Expr1067506 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term