WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024886 Gene Name  CBG01688
Sequence Name  ? CBG01688 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: TDU repeat. Is an ortholog of C. elegans R08C7.12. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG01688.1 CBG01688.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG01688 CBG01688   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00069386
WBVar00069391
WBVar00069406
WBVar00069376
WBVar00069411
WBVar00069381
WBVar00069396
WBVar00069401

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG01688, AAGTGGCCAAAACGATGCAAAGTGAATTCAGAAGAGGCTCGAAGCTCCCCACTTCGTCGT, WBGene00024886   Expr1067438 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG26436, GCAACACATCGGAGACGTCGTTGGAGTCTTCAGTCTCCGTTTCTACCAACAGTTTCGACT, WBGene00087850   Expr1069600 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term