WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034378 Gene Name  CBG13640
Sequence Name  ? CBG13640 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: S phase cyclin A-associated protein in the endoplasmic reticulum and S phase cyclin A-associated protein in the endoplasmic reticulum, N-terminal. Is an ortholog of C. elegans Y6B3B.4. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13640.1 CBG13640.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13640 CBG13640   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00015597
WBVar00120180
WBVar00120181
WBVar00120182
WBVar00120183
WBVar00120184
WBVar00120185
WBVar00120186
WBVar00120177
WBVar00120178
WBVar00120179
WBVar00120190
WBVar00120187
WBVar00120188
WBVar00120189

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG13640, TTCACATTCTCCTCCATAAAATCCCAATCCGCCTACTCTCGATTGGAAAACACGCGAAAC, WBGene00034378   Expr1065252 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term