WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037944 Gene Name  Cbr-him-19
Sequence Name  ? CBG18547 Organism  Caenorhabditis briggsae
Automated Description  Is an ortholog of C. elegans him-19. In C. elegans, him-19 is involved in meiotic DNA double-strand break formation and regulation of synaptonemal complex assembly. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18547a.1 CBG18547a.1   [unknown]
Transcript:CBG18547b.1 CBG18547b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18547b CBG18547b   [unknown]
CDS:CBG18547a CBG18547a   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00018854
WBVar00126480
WBVar00126479
WBVar00126474
WBVar00126477
WBVar00126478
WBVar00126475
WBVar00126476

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-him-19, TTGGACGGTCCATTGATCACCGTGTTCAACAAAGATCGTTTGTACAAAGCGACATCATAA, WBGene00037944   Expr1058968 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term