WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0035925 mRNA 3'-UTR AU-rich region binding GO

Namespace  molecular_function Obsolete  false
Description  Binding to a region containing frequent adenine and uridine bases within the 3' untranslated region of a mRNA molecule or in pre-mRNA intron. The ARE-binding element consensus is UUAUUUAUU. ARE-binding proteins control the stability and/or translation of mRNAs.

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  enables

7 Parents

Identifier Name Description
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003723 RNA binding Binding to an RNA molecule or a portion thereof.
GO:0003676 nucleic acid binding Binding to a nucleic acid.
GO:0003729 mRNA binding Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
GO:0003730 mRNA 3'-UTR binding Binding to a 3' untranslated region of an mRNA molecule.
GO:0035925 mRNA 3'-UTR AU-rich region binding Binding to a region containing frequent adenine and uridine bases within the 3' untranslated region of a mRNA molecule or in pre-mRNA intron. The ARE-binding element consensus is UUAUUUAUU. ARE-binding proteins control the stability and/or translation of mRNAs.

6 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0003730 GO:0035925
is_a GO:0005488 GO:0035925
is_a GO:0003674 GO:0035925
is_a GO:0003729 GO:0035925
is_a GO:0003676 GO:0035925
is_a GO:0003723 GO:0035925

5 Synonyms

Name Type
ARE binding synonym
adenylate/uridylate-rich element binding synonym
mRNA 3'-UTR adenylate/uridylate-rich element binding synonym
AU-rich element binding synonym
GO:0017091 alt_id