WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:1990121 H-NS complex GO

Namespace  cellular_component Obsolete  false
Description  A multimer of H-NS proteins that is involved in bacterial nucleoid condensation and negative regulation of global gene expression by directly binding to promoter regions. Recognizes both structural and sequence-specific motifs in double-stranded DNA and has binding preference for bent DNA.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

14 Parents

Identifier Name Description
GO:0005829 cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
GO:0032991 protein-containing complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
GO:0005737 cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0005575 cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).
GO:0005622 intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm.
GO:0110165 cellular anatomical structure A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0043228 membraneless organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes.
GO:0043232 intracellular membraneless organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
GO:0009295 nucleoid The region of a virus, bacterial cell, mitochondrion or chloroplast to which the nucleic acid is confined.
GO:0043590 bacterial nucleoid The region of a bacterial cell to which the DNA is confined.
GO:1990121 H-NS complex A multimer of H-NS proteins that is involved in bacterial nucleoid condensation and negative regulation of global gene expression by directly binding to promoter regions. Recognizes both structural and sequence-specific motifs in double-stranded DNA and has binding preference for bent DNA.
GO:1990104 DNA bending complex A protein-DNA complex that contains DNA in combination with a protein which binds to and bends DNA. Often plays a role in DNA compaction.

16 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
has part GO:1990121 GO:0036411
has part GO:1990121 GO:0097495
part of GO:0043590 GO:1990121
is_a GO:1990104 GO:1990121
part of GO:0005829 GO:1990121
part of GO:0005575 GO:1990121
part of GO:0043226 GO:1990121
is_a GO:0005575 GO:1990121
part of GO:0043232 GO:1990121
part of GO:0009295 GO:1990121
part of GO:0005737 GO:1990121
is_a GO:0032991 GO:1990121
part of GO:0043229 GO:1990121
part of GO:0110165 GO:1990121
part of GO:0043228 GO:1990121
part of GO:0005622 GO:1990121

2 Synonyms

Name Type
DNA-binding protein H-NS complex synonym
histone-like protein H-NS complex synonym