WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0043505 CENP-A containing nucleosome GO

Namespace  cellular_component Obsolete  false
Description  A form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

17 Parents

Identifier Name Description
GO:0032991 protein-containing complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
GO:0005575 cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).
GO:0005622 intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm.
GO:0110165 cellular anatomical structure A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0043228 membraneless organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes.
GO:0043232 intracellular membraneless organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
GO:0000785 chromatin The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
GO:0005694 chromosome A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
GO:0000775 chromosome, centromeric region The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
GO:0098687 chromosomal region Any subdivision of a chromosome along its length.
GO:0032993 protein-DNA complex A macromolecular complex containing both protein and DNA molecules.
GO:0000786 nucleosome A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO:0034506 chromosome, centromeric core domain The innermost portion of the centromeric region of a chromosome, encompassing the core region of a chromosome centromere and the proteins that bind to it.
GO:0061638 CENP-A containing chromatin The specialized chromatin located in the centromeric core region or the entire centromeric region in organisms with point centromeres, which is enriched for CENP-A-containing nucleosomes. This chromatin forms a 3-dimensional structure which provides a platform for kinetochore assembly and microtubule attachment.
GO:0043505 CENP-A containing nucleosome A form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).

17 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
part of GO:0061638 GO:0043505
is_a GO:0000786 GO:0043505
part of GO:0043232 GO:0043505
is_a GO:0032991 GO:0043505
is_a GO:0005575 GO:0043505
is_a GO:0032993 GO:0043505
part of GO:0098687 GO:0043505
part of GO:0005694 GO:0043505
part of GO:0110165 GO:0043505
part of GO:0034506 GO:0043505
part of GO:0000775 GO:0043505
part of GO:0000785 GO:0043505
part of GO:0043229 GO:0043505
part of GO:0043228 GO:0043505
part of GO:0005622 GO:0043505
part of GO:0043226 GO:0043505
part of GO:0005575 GO:0043505

6 Synonyms

Name Type
CenH3 containing nucleosome synonym
CENP-S-T-W-X synonym
centromere specific nucleosome synonym
centromere-specific nucleosome synonym
centromeric nucleosome synonym
CNP-T-W-S-X complex synonym