WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00135824 Gene Name  Cjp-mib-1
Sequence Name  ? CJA16620 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Ankyrin repeat; Ankyrin repeats (many copies); Zinc finger, RING/FYVE/PHD-type; Domain of unknown function DUF3447; Zinc finger, C3HC4 type (RING finger); Zinc finger, RING-type; Ankyrin repeat-containing domain superfamily; and Ankyrin repeats (3 copies). Is an ortholog of C. elegans mib-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA16620b.1 CJA16620b.1   [unknown]
Transcript:CJA16620a.1 CJA16620a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA16620a CJA16620a   [unknown]
CDS:CJA16620b CJA16620b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA16620, GCTGAATGTGTTGAAGAAAAAGTTGGAGCAACTCGAGTTGGAGACGAGCTGTGCTATTTG, WBGene00135824   Expr1082444 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term