WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039574 Gene Name  Cbr-acs-11
Sequence Name  ? CBG20626 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: AMP-dependent synthetase/ligase; AMP-binding enzyme C-terminal domain; ANL, N-terminal domain; AMP-binding enzyme, C-terminal domain; and AMP-binding enzyme. Is an ortholog of C. elegans acs-11. In C. elegans, acs-11 is involved in IRE1-mediated unfolded protein response. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20626.1 CBG20626.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20626 CBG20626   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00029432

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG20626, GCCGTTGTTGCAGTTGTAGTTCCAGCAGAGAAAGTGACCGATGAGAAGGAGTTTGAGAAA, WBGene00039574   Expr1057413 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term