WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120956 Gene Name  Cjp-jmjd-3.1
Sequence Name  ? CJA01752 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: JmjC domain and JmjC domain, hydroxylase. Is an ortholog of C. elegans jmjd-3.1. In C. elegans, jmjd-3.1 is involved in transdifferentiation. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA01752c.1 CJA01752c.1   [unknown]
Transcript:CJA01752b.1 CJA01752b.1   [unknown]
Transcript:CJA01752a.1 CJA01752a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA01752b CJA01752b   [unknown]
CDS:CJA01752a CJA01752a   [unknown]
CDS:CJA01752c CJA01752c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-tag-279, GCTTTCATTGGGTGCAAGCTGCAGGATATTGTGTGAATGTGAGTTGGAATGTCGGACAAC, WBGene00120956   Expr1085389 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term