WormMine: Gene WBGene00027252

• WormBase Gene ID: WBGene00027252
• Gene Name: CBG04613
• Sequence Name: CBG04613
• Organism: Caenorhabditis briggsae
• Automated Description: Is affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domain: Reeler domain. Is an ortholog of C. elegans F23B12.4.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG04613b.1	CBG04613b.1		[unknown]
Transcript:CBG04613a.1	CBG04613a.1		[unknown]

Other

2 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG04613b	CBG04613b		[unknown]
CDS:CBG04613a	CBG04613a		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in Cbr-spr-4(gu163) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-spr-4(gu163)_downregulated

2 Expression Patterns

• Primary Identifier: Expr1057841
• Remark: CBG04613, CTCCAGGAGACGTGGACAAAGCAACAGCTTCTCTGCGAATAGACAGAATGTATTCCAGCA, WBGene00027252
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1063267
• Remark: CBG04614, GATTCAGCCTTTCAAATGGAACAACGATCAACTCGGAGAACGATTTGGACAACTTGTGAG, WBGene00027253
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term