WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00134938 Gene Name  Cjp-szy-20
Sequence Name  ? CJA15734 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: SUZ domain and SUZ domain-containing protein 1. Is an ortholog of C. elegans szy-20. In C. elegans, szy-20 is involved in several processes, including negative regulation of protein localization to centrosome; positive regulation of fertilization; and regulation of cell cycle. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA15734c.1 CJA15734c.1   [unknown]
Transcript:CJA15734a.1 CJA15734a.1   [unknown]
Transcript:CJA15734b.1 CJA15734b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA15734a CJA15734a   [unknown]
CDS:CJA15734b CJA15734b   [unknown]
CDS:CJA15734c CJA15734c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-pqn-14, CGGAATGGAGGTCAGCAGAGGCAGATTGCGCCGAATCAGCGGAAGAATATGAATAGTGGC, WBGene00134938   Expr1081540 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term