WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028568 Gene Name  Cbr-vps-8
Sequence Name  ? CBG06265 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Anaphase-promoting complex subunit 4, WD40 domain; WD40/YVTN repeat-like-containing domain superfamily; Anaphase-promoting complex subunit 4 WD40 domain; Golgi CORVET complex core vacuolar protein 8; Vacuolar protein sorting-associated protein 8, central domain; and WD40-repeat-containing domain superfamily. Is an ortholog of C. elegans vps-8. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06265.1 CBG06265.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06265 CBG06265   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG06265, CACTAATATTGAAAAAGTTTGCACATGCAACGGTTTCTCCAATCCACTAGTCGTACCTCG, WBGene00028568   Expr1059518 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term