WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00059331 Gene Name  Cre-hcf-1
Sequence Name  ? CRE10832 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Kelch-type beta propeller; Galactose oxidase/kelch, beta-propeller; Fibronectin type III; Immunoglobulin-like fold; Host cell factor 1; Kelch motif; Kelch repeat type 1; Galactose oxidase, central domain; and Fibronectin type III superfamily. Is an ortholog of C. elegans hcf-1. In C. elegans, hcf-1 is involved in several processes, including dauer exit; determination of adult lifespan; and regulation of DNA-templated transcription. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE10832.1 CRE10832.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE10832 CRE10832   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-hcf-1, TGGCAGTGAAGAGTCAAACGGCAAATCCTGCTGATAGTCAGTTGGCATTCATGAGAGTGT, WBGene00059331   Expr1109414 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term