WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00070759 Gene Name  Cre-ubql-1
Sequence Name  ? CRE14291 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Ubiquitin family; Ubiquitin-associated domain; UBA/TS-N domain; Ubiquitin-like domain superfamily; Heat shock chaperonin-binding; Ubiquitin-like domain; and UBA-like superfamily. Is an ortholog of C. elegans ubql-1. In C. elegans, ubql-1 is involved in ERAD pathway; negative regulation of double-strand break repair via homologous recombination; and protein export from nucleus. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE14291.1 CRE14291.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE14291 CRE14291   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE14291, TCAGGCGAGCATGTTCAGTCCAGAAGTCATCGATTCTATTCGTCAGAATATGTCTAGCAA, WBGene00070759   Expr1110106 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term