WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00051217 Gene Name  Cre-xol-1.1
Sequence Name  ? CRE00480 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Switch protein XOL-1, N-terminal; Ribosomal protein S5 domain 2-type fold, subgroup; Switch protein XOL-1, GHMP-like; GHMP kinase, C-terminal domain superfamily; and Ribosomal protein S5 domain 2-type fold. Is an ortholog of C. elegans xol-1. In C. elegans, xol-1 is involved in dosage compensation by hypoactivation of X chromosome; intergenic mRNA trans splicing; and male sex determination. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE00480.1 CRE00480.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE00480 CRE00480   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE00480, ACAACTTTAGAGTCTTCAAAGGCTTTGAAATTCAGCAAGGAGGAATACTGTTGGCTCTGA, WBGene00051217   Expr1111851 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term